Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.38■□□□□ 0.05
Rfwd3Q8CIK8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Gm29707-201ENSMUST00000196325 491 ntBASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfwd3Q8CIK8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Haglr-201ENSMUST00000100000 2085 ntBASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Gm18421-201ENSMUST00000204122 625 ntBASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfwd3Q8CIK8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfwd3Q8CIK8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms