Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clip4Q8CI96 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.47■□□□□ 0.23
Clip4Q8CI96 Mir1668-201ENSMUST00000184114 107 ntBASIC16.47■□□□□ 0.23
Clip4Q8CI96 Gm7213-201ENSMUST00000215977 950 ntBASIC16.47■□□□□ 0.23
Clip4Q8CI96 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.47■□□□□ 0.23
Clip4Q8CI96 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clip4Q8CI96 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Gm18958-201ENSMUST00000174258 762 ntBASIC16.46■□□□□ 0.23
Clip4Q8CI96 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clip4Q8CI96 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clip4Q8CI96 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clip4Q8CI96 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clip4Q8CI96 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clip4Q8CI96 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.45■□□□□ 0.22
Clip4Q8CI96 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms