Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb7Q8CDY9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb7Q8CDY9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb7Q8CDY9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.39■□□□□ 0.22
Pcdhb7Q8CDY9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms