Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Gm27357-201ENSMUST00000183754 135 ntBASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Gm27742-201ENSMUST00000184667 60 ntBASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Vps53Q8CCB4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Gm10566-201ENSMUST00000086739 996 ntBASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps53Q8CCB4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Gm44771-201ENSMUST00000206975 626 ntBASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps53Q8CCB4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps53Q8CCB4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Gm45328-201ENSMUST00000210942 917 ntBASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms