Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Lin9Q8C735 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Lin9Q8C735 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.84■□□□□ 0.45
Lin9Q8C735 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.84■□□□□ 0.45
Lin9Q8C735 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.84■□□□□ 0.45
Lin9Q8C735 Gm18115-201ENSMUST00000221209 621 ntBASIC17.84■□□□□ 0.45
Lin9Q8C735 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin9Q8C735 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lin9Q8C735 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lin9Q8C735 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Lin9Q8C735 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
Lin9Q8C735 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lin9Q8C735 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lin9Q8C735 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lin9Q8C735 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Lin9Q8C735 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Lin9Q8C735 Gm28033-201ENSMUST00000184224 96 ntBASIC17.83■□□□□ 0.44
Lin9Q8C735 Gm37722-201ENSMUST00000193757 208 ntBASIC17.83■□□□□ 0.44
Lin9Q8C735 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Lin9Q8C735 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.83■□□□□ 0.44
Lin9Q8C735 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Lin9Q8C735 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.83■□□□□ 0.44
Lin9Q8C735 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.83■□□□□ 0.44
Lin9Q8C735 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Lin9Q8C735 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin9Q8C735 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.82■□□□□ 0.44
Lin9Q8C735 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.82■□□□□ 0.44
Lin9Q8C735 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lin9Q8C735 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lin9Q8C735 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.82■□□□□ 0.44
Lin9Q8C735 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.82■□□□□ 0.44
Lin9Q8C735 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Lin9Q8C735 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lin9Q8C735 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lin9Q8C735 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin9Q8C735 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.81■□□□□ 0.44
Lin9Q8C735 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Lin9Q8C735 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.81■□□□□ 0.44
Lin9Q8C735 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.81■□□□□ 0.44
Lin9Q8C735 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lin9Q8C735 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Lin9Q8C735 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lin9Q8C735 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin9Q8C735 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin9Q8C735 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin9Q8C735 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Lin9Q8C735 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin9Q8C735 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin9Q8C735 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin9Q8C735 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin9Q8C735 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms