Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.59■□□□□ 0.09
Cfap54Q8C6S9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cfap54Q8C6S9 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.58■□□□□ 0.09
Cfap54Q8C6S9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cfap54Q8C6S9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Gm11764-201ENSMUST00000120221 623 ntBASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap54Q8C6S9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Gm27300-201ENSMUST00000184085 97 ntBASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Gm27335-201ENSMUST00000184758 97 ntBASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Gm20949-201ENSMUST00000206478 952 ntBASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cfap54Q8C6S9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cfap54Q8C6S9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Gm4899-201ENSMUST00000178708 719 ntBASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap54Q8C6S9 Gm13597-201ENSMUST00000121239 375 ntBASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms