Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Gm18733-201ENSMUST00000173950 856 ntBASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf2Q8BZT2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3rf2Q8BZT2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3rf2Q8BZT2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Sh3rf2Q8BZT2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Sh3rf2Q8BZT2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf2Q8BZT2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Gm6443-201ENSMUST00000203599 874 ntBASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Sh3rf2Q8BZT2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Gm7862-201ENSMUST00000121461 292 ntBASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Gm7506-201ENSMUST00000207758 815 ntBASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sh3rf2Q8BZT2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms