Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm12644-201ENSMUST00000119935 606 ntBASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdk5rap1Q8BTW8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.47■□□□□ 0.07
Cdk5rap1Q8BTW8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm28659-201ENSMUST00000188013 759 ntBASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm36967-201ENSMUST00000193814 266 ntBASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap1Q8BTW8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdk5rap1Q8BTW8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Cdk5rap1Q8BTW8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdk5rap1Q8BTW8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdk5rap1Q8BTW8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdk5rap1Q8BTW8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdk5rap1Q8BTW8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Mir8098-201ENSMUST00000184011 137 ntBASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap1Q8BTW8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms