Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne3Q8BT60 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne3Q8BT60 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.77■□□□□ 0.12
Cpne3Q8BT60 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne3Q8BT60 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.77■□□□□ 0.11
Cpne3Q8BT60 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.77■□□□□ 0.11
Cpne3Q8BT60 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne3Q8BT60 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne3Q8BT60 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne3Q8BT60 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms