Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc43a1Q8BSM7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc43a1Q8BSM7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Gm18206-201ENSMUST00000207027 926 ntBASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Gm7506-201ENSMUST00000207758 815 ntBASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 AW822252-206ENSMUST00000208904 237 ntBASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Gm10060-201ENSMUST00000212002 111 ntBASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc43a1Q8BSM7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Mir5131-201ENSMUST00000175426 93 ntBASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc43a1Q8BSM7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Gm12497-201ENSMUST00000138778 237 ntBASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc43a1Q8BSM7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms