Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 App-207ENSMUST00000227737 2827 ntBASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm9987-201ENSMUST00000069768 567 ntBASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ppp1r3eQ8BRJ4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ppp1r3eQ8BRJ4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms