Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm2651-201ENSMUST00000203560 838 ntBASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Gm4535-201ENSMUST00000182274 558 ntBASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Gm10060-201ENSMUST00000212002 111 ntBASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Gm10355-201ENSMUST00000097146 517 ntBASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scfd1Q8BRF7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scfd1Q8BRF7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Gm13418-201ENSMUST00000119097 944 ntBASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 AW822252-206ENSMUST00000208904 237 ntBASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scfd1Q8BRF7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scfd1Q8BRF7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Scfd1Q8BRF7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scfd1Q8BRF7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scfd1Q8BRF7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scfd1Q8BRF7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scfd1Q8BRF7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Gm25990-201ENSMUST00000102440 86 ntBASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Mir5131-201ENSMUST00000175426 93 ntBASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scfd1Q8BRF7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.57■□□□□ 0.56
Scfd1Q8BRF7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms