Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.5□□□□□ -0.25
Smco3Q8BQM7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Mir6349-201ENSMUST00000184059 97 ntBASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smco3Q8BQM7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smco3Q8BQM7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms