Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Gm11025-201ENSMUST00000140773 466 ntBASIC21.3■■□□□ 1
Col16a1Q8BLX7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Gm44872-201ENSMUST00000207864 420 ntBASIC21.3■■□□□ 1
Col16a1Q8BLX7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC21.3■■□□□ 1
Col16a1Q8BLX7 AC154572.2-201ENSMUST00000225105 997 ntBASIC21.3■■□□□ 1
Col16a1Q8BLX7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC21.3■■□□□ 1
Col16a1Q8BLX7 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm8825-201ENSMUST00000182565 998 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm4518-201ENSMUST00000182638 718 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Mir6956-201ENSMUST00000183598 62 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.29■■□□□ 1
Col16a1Q8BLX7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.29■■□□□ 1
Col16a1Q8BLX7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col16a1Q8BLX7 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.28■■□□□ 1
Col16a1Q8BLX7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Gm8344-201ENSMUST00000119813 856 ntBASIC21.28■■□□□ 1
Col16a1Q8BLX7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC21.28■■□□□ 1
Col16a1Q8BLX7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col16a1Q8BLX7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Gm37171-201ENSMUST00000192636 1185 ntBASIC21.27■■□□□ 1
Col16a1Q8BLX7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms