Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Gm4459-201ENSMUST00000118750 468 ntBASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcal1Q8BJL0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Gm25406-201ENSMUST00000157599 105 ntBASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcal1Q8BJL0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcal1Q8BJL0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcal1Q8BJL0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Smarcal1Q8BJL0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Gm8097-201ENSMUST00000117903 829 ntBASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Gm11780-201ENSMUST00000136880 516 ntBASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcal1Q8BJL0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Gm6550-201ENSMUST00000187574 993 ntBASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcal1Q8BJL0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Gm15173-201ENSMUST00000122049 433 ntBASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcal1Q8BJL0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Gm25925-201ENSMUST00000158314 306 ntBASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms