Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Gm715-201ENSMUST00000117865 831 ntBASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2bQ8BJF9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Chmp2bQ8BJF9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2bQ8BJF9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.71■□□□□ 0.27
Chmp2bQ8BJF9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms