Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh20Q8BIZ0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh20Q8BIZ0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.96■□□□□ 0.14
Pcdh20Q8BIZ0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pcdh20Q8BIZ0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh20Q8BIZ0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh20Q8BIZ0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh20Q8BIZ0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh20Q8BIZ0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh20Q8BIZ0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Gm10013-201ENSMUST00000106074 672 ntBASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh20Q8BIZ0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms