Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn3bQ8BHK2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn3bQ8BHK2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Gm5874-201ENSMUST00000096101 508 ntBASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn3bQ8BHK2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Gm13148-201ENSMUST00000118892 745 ntBASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn3bQ8BHK2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn3bQ8BHK2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms