Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Gm42642-201ENSMUST00000200683 355 ntBASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc5a7Q8BGY9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc5a7Q8BGY9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.33□□□□□ -0.11
Slc5a7Q8BGY9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc5a7Q8BGY9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Slc5a7Q8BGY9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc5a7Q8BGY9 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.33□□□□□ -0.12
Slc5a7Q8BGY9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms