Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npas4Q8BGD7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Gm43575-201ENSMUST00000196420 516 ntBASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.15■□□□□ 0.34
Npas4Q8BGD7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npas4Q8BGD7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Npas4Q8BGD7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Npas4Q8BGD7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npas4Q8BGD7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms