Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lrsam1Q80ZI6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Gm24841-201ENSMUST00000158676 357 ntBASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrsam1Q80ZI6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Gm17971-201ENSMUST00000190239 806 ntBASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Gm43183-201ENSMUST00000200632 547 ntBASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrsam1Q80ZI6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrsam1Q80ZI6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Gm37025-201ENSMUST00000195159 829 ntBASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrsam1Q80ZI6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms