Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Gm11620-201ENSMUST00000118770 1845 ntBASIC18■□□□□ 0.47
Usp6nlQ80XC3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Gm6550-201ENSMUST00000187574 993 ntBASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp6nlQ80XC3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Gm2213-201ENSMUST00000197485 688 ntBASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Usp6nlQ80XC3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Gm8655-201ENSMUST00000221159 852 ntBASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp6nlQ80XC3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Gm13036-201ENSMUST00000117799 748 ntBASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Gm9172-201ENSMUST00000212092 954 ntBASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp6nlQ80XC3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp6nlQ80XC3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Gm25406-201ENSMUST00000157599 105 ntBASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Gm27628-201ENSMUST00000184911 107 ntBASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms