Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44357-201ENSMUST00000195897 142 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm19658-201ENSMUST00000196231 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44367-201ENSMUST00000196836 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44350-201ENSMUST00000197197 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44390-201ENSMUST00000197533 144 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44313-201ENSMUST00000198018 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44486-201ENSMUST00000198508 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44454-201ENSMUST00000198541 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44314-201ENSMUST00000199263 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44394-201ENSMUST00000199558 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44484-201ENSMUST00000199873 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44466-201ENSMUST00000200264 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Gm44359-201ENSMUST00000200671 138 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.77■□□□□ 0.6
Prpf40bQ80W14 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Prpf40bQ80W14 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf40bQ80W14 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf40bQ80W14 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.77■□□□□ 0.59
Prpf40bQ80W14 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf40bQ80W14 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.77■□□□□ 0.59
Prpf40bQ80W14 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf40bQ80W14 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Gm15467-201ENSMUST00000120582 445 ntBASIC18.75■□□□□ 0.59
Prpf40bQ80W14 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf40bQ80W14 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms