Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pif1Q80SX8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.03■□□□□ -0
Pif1Q80SX8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.03■□□□□ -0
Pif1Q80SX8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.03■□□□□ -0
Pif1Q80SX8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Pif1Q80SX8 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.03■□□□□ -0
Pif1Q80SX8 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.03■□□□□ -0
Pif1Q80SX8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Pif1Q80SX8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pif1Q80SX8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pif1Q80SX8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pif1Q80SX8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Pif1Q80SX8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pif1Q80SX8 Gm27525-201ENSMUST00000184465 107 ntBASIC15.02■□□□□ -0
Pif1Q80SX8 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.02■□□□□ -0
Pif1Q80SX8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.02■□□□□ -0
Pif1Q80SX8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.02□□□□□ -0.01
Pif1Q80SX8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pif1Q80SX8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pif1Q80SX8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pif1Q80SX8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Gm18856-201ENSMUST00000178096 1374 ntBASIC15□□□□□ -0.01
Pif1Q80SX8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms