Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Mir3113-201ENSMUST00000175478 76 ntBASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snrnp40Q6PE01 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Snrnp40Q6PE01 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Mir8117-201ENSMUST00000184773 107 ntBASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snrnp40Q6PE01 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms