Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd4Q6PDQ2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Gm13597-201ENSMUST00000121239 375 ntBASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd4Q6PDQ2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Gm2756-201ENSMUST00000195851 400 ntBASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd4Q6PDQ2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd4Q6PDQ2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Gm6736-201ENSMUST00000166583 948 ntBASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Gm11873-201ENSMUST00000117877 1304 ntBASIC21.19■□□□□ 0.98
Chd4Q6PDQ2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 Mir3113-201ENSMUST00000175478 76 ntBASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd4Q6PDQ2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Gm24513-201ENSMUST00000174964 138 ntBASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms