Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.31■□□□□ 0.52
Abcf1Q6P542 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.3■□□□□ 0.52
Abcf1Q6P542 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcf1Q6P542 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Gm6433-201ENSMUST00000118634 875 ntBASIC18.29■□□□□ 0.52
Abcf1Q6P542 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcf1Q6P542 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gm11539-201ENSMUST00000119837 557 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gm13436-201ENSMUST00000120418 567 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gm13836-201ENSMUST00000121159 501 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gm37025-201ENSMUST00000195159 829 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gm9987-201ENSMUST00000069768 567 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.28■□□□□ 0.52
Abcf1Q6P542 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcf1Q6P542 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms