Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl3Q6P1Y1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Gm15794-201ENSMUST00000120182 631 ntBASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Gm10052-201ENSMUST00000168019 960 ntBASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Gm7729-201ENSMUST00000050143 801 ntBASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl3Q6P1Y1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl3Q6P1Y1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl3Q6P1Y1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl3Q6P1Y1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl3Q6P1Y1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl3Q6P1Y1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl3Q6P1Y1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl3Q6P1Y1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl3Q6P1Y1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl3Q6P1Y1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Olfr129-201ENSMUST00000122318 993 ntBASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.82■□□□□ 0.28
Rtl3Q6P1Y1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms