Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hdac4Q6NZM9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hdac4Q6NZM9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Mir770-201ENSMUST00000103252 94 ntBASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Gm9013-201ENSMUST00000132939 882 ntBASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Hdac4Q6NZM9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hdac4Q6NZM9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hdac4Q6NZM9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Hdac4Q6NZM9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hdac4Q6NZM9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Hdac4Q6NZM9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac4Q6NZM9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac4Q6NZM9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac4Q6NZM9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.25■□□□□ 0.51
Hdac4Q6NZM9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hdac4Q6NZM9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac4Q6NZM9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac4Q6NZM9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hdac4Q6NZM9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms