Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.69■□□□□ 0.74
Col11a2Q64739 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col11a2Q64739 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.69■□□□□ 0.74
Col11a2Q64739 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col11a2Q64739 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col11a2Q64739 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.68■□□□□ 0.74
Col11a2Q64739 Gm13365-201ENSMUST00000121188 973 ntBASIC19.68■□□□□ 0.74
Col11a2Q64739 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Col11a2Q64739 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col11a2Q64739 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col11a2Q64739 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col11a2Q64739 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col11a2Q64739 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.68■□□□□ 0.74
Col11a2Q64739 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col11a2Q64739 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Col11a2Q64739 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col11a2Q64739 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.68■□□□□ 0.74
Col11a2Q64739 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col11a2Q64739 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col11a2Q64739 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col11a2Q64739 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.67■□□□□ 0.74
Col11a2Q64739 Gm23547-201ENSMUST00000158210 271 ntBASIC19.67■□□□□ 0.74
Col11a2Q64739 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.67■□□□□ 0.74
Col11a2Q64739 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.67■□□□□ 0.74
Col11a2Q64739 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.67■□□□□ 0.74
Col11a2Q64739 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Col11a2Q64739 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col11a2Q64739 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.66■□□□□ 0.74
Col11a2Q64739 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col11a2Q64739 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.66■□□□□ 0.74
Col11a2Q64739 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.66■□□□□ 0.74
Col11a2Q64739 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col11a2Q64739 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Iqck-206ENSMUST00000208658 2891 ntBASIC19.65■□□□□ 0.74
Col11a2Q64739 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.65■□□□□ 0.74
Col11a2Q64739 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col11a2Q64739 Gm27622-201ENSMUST00000183779 60 ntBASIC19.65■□□□□ 0.74
Col11a2Q64739 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col11a2Q64739 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col11a2Q64739 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Col11a2Q64739 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Gm12428-201ENSMUST00000119844 727 ntBASIC19.65■□□□□ 0.74
Col11a2Q64739 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.65■□□□□ 0.74
Col11a2Q64739 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.65■□□□□ 0.74
Col11a2Q64739 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col11a2Q64739 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col11a2Q64739 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Col11a2Q64739 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.64■□□□□ 0.74
Col11a2Q64739 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col11a2Q64739 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.64■□□□□ 0.74
Col11a2Q64739 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.64■□□□□ 0.74
Col11a2Q64739 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Col11a2Q64739 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col11a2Q64739 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Col11a2Q64739 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Col11a2Q64739 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a2Q64739 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms