Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.69■□□□□ 0.1
Sdc3Q64519 Olfr129-201ENSMUST00000122318 993 ntBASIC15.69■□□□□ 0.1
Sdc3Q64519 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sdc3Q64519 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.69■□□□□ 0.1
Sdc3Q64519 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sdc3Q64519 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sdc3Q64519 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc3Q64519 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.68■□□□□ 0.1
Sdc3Q64519 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.68■□□□□ 0.1
Sdc3Q64519 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.68■□□□□ 0.1
Sdc3Q64519 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Sdc3Q64519 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Mir3081-201ENSMUST00000175305 84 ntBASIC15.68■□□□□ 0.1
Sdc3Q64519 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Sdc3Q64519 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Sdc3Q64519 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.68■□□□□ 0.1
Sdc3Q64519 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc3Q64519 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.67■□□□□ 0.1
Sdc3Q64519 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.67■□□□□ 0.1
Sdc3Q64519 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.67■□□□□ 0.1
Sdc3Q64519 Gm28033-201ENSMUST00000184224 96 ntBASIC15.67■□□□□ 0.1
Sdc3Q64519 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sdc3Q64519 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Sdc3Q64519 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.67■□□□□ 0.1
Sdc3Q64519 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.67■□□□□ 0.1
Sdc3Q64519 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc3Q64519 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sdc3Q64519 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.66■□□□□ 0.1
Sdc3Q64519 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sdc3Q64519 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.66■□□□□ 0.1
Sdc3Q64519 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.66■□□□□ 0.1
Sdc3Q64519 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.66■□□□□ 0.1
Sdc3Q64519 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc3Q64519 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc3Q64519 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sdc3Q64519 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc3Q64519 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc3Q64519 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc3Q64519 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc3Q64519 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc3Q64519 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms