Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Phf7-203ENSMUST00000226565 1971 ntBASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptp4a1Q63739 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ptp4a1Q63739 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ptp4a1Q63739 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ptp4a1Q63739 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptp4a1Q63739 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Gm5417-201ENSMUST00000079706 384 ntBASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ptp4a1Q63739 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.68□□□□□ -0.06
Ptp4a1Q63739 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Ptp4a1Q63739 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms