Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vamp1Q62442 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.03□□□□□ -0.16
Vamp1Q62442 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.03□□□□□ -0.16
Vamp1Q62442 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.03□□□□□ -0.16
Vamp1Q62442 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.03□□□□□ -0.16
Vamp1Q62442 Gm44549-201ENSMUST00000208351 577 ntBASIC14.03□□□□□ -0.16
Vamp1Q62442 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Gm6365-201ENSMUST00000054711 744 ntBASIC14.03□□□□□ -0.16
Vamp1Q62442 Gm15823-201ENSMUST00000064305 670 ntBASIC14.03□□□□□ -0.16
Vamp1Q62442 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.03□□□□□ -0.16
Vamp1Q62442 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.03□□□□□ -0.16
Vamp1Q62442 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.03□□□□□ -0.16
Vamp1Q62442 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.03□□□□□ -0.16
Vamp1Q62442 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vamp1Q62442 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Vamp1Q62442 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.02□□□□□ -0.16
Vamp1Q62442 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.02□□□□□ -0.16
Vamp1Q62442 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.02□□□□□ -0.16
Vamp1Q62442 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.02□□□□□ -0.16
Vamp1Q62442 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Vamp1Q62442 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.02□□□□□ -0.16
Vamp1Q62442 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp1Q62442 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Gm6576-201ENSMUST00000169678 883 ntBASIC14.02□□□□□ -0.17
Vamp1Q62442 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.02□□□□□ -0.17
Vamp1Q62442 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.02□□□□□ -0.17
Vamp1Q62442 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Vamp1Q62442 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp1Q62442 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.02□□□□□ -0.17
Vamp1Q62442 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Vamp1Q62442 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.01□□□□□ -0.17
Vamp1Q62442 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vamp1Q62442 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Vamp1Q62442 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.01□□□□□ -0.17
Vamp1Q62442 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vamp1Q62442 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp1Q62442 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.01□□□□□ -0.17
Vamp1Q62442 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14□□□□□ -0.17
Vamp1Q62442 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vamp1Q62442 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Vamp1Q62442 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms