Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SspnQ62147 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SspnQ62147 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.68□□□□□ -0.22
SspnQ62147 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
SspnQ62147 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SspnQ62147 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SspnQ62147 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SspnQ62147 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.67□□□□□ -0.22
SspnQ62147 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.67□□□□□ -0.22
SspnQ62147 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SspnQ62147 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.67□□□□□ -0.22
SspnQ62147 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SspnQ62147 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.67□□□□□ -0.22
SspnQ62147 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SspnQ62147 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspnQ62147 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SspnQ62147 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
SspnQ62147 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SspnQ62147 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SspnQ62147 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SspnQ62147 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.66□□□□□ -0.22
SspnQ62147 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.66□□□□□ -0.22
SspnQ62147 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
SspnQ62147 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.66□□□□□ -0.22
SspnQ62147 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspnQ62147 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.65□□□□□ -0.22
SspnQ62147 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.65□□□□□ -0.22
SspnQ62147 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SspnQ62147 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.65□□□□□ -0.22
SspnQ62147 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.65□□□□□ -0.22
SspnQ62147 Gm30025-201ENSMUST00000218555 728 ntBASIC13.65□□□□□ -0.22
SspnQ62147 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SspnQ62147 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms