Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccne1Q61457 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccne1Q61457 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccne1Q61457 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccne1Q61457 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.18■□□□□ 0.98
Ccne1Q61457 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccne1Q61457 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccne1Q61457 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccne1Q61457 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccne1Q61457 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Gm12260-201ENSMUST00000122447 411 ntBASIC21.17■□□□□ 0.98
Ccne1Q61457 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccne1Q61457 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Ccne1Q61457 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccne1Q61457 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Ccne1Q61457 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccne1Q61457 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Ccne1Q61457 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.16■□□□□ 0.98
Ccne1Q61457 Gm14140-201ENSMUST00000119999 995 ntBASIC21.16■□□□□ 0.98
Ccne1Q61457 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccne1Q61457 Mir6404-201ENSMUST00000183699 94 ntBASIC21.16■□□□□ 0.98
Ccne1Q61457 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.16■□□□□ 0.98
Ccne1Q61457 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.16■□□□□ 0.98
Ccne1Q61457 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ccne1Q61457 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccne1Q61457 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccne1Q61457 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccne1Q61457 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Gm4995-201ENSMUST00000117247 432 ntBASIC21.15■□□□□ 0.98
Ccne1Q61457 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.15■□□□□ 0.98
Ccne1Q61457 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.15■□□□□ 0.98
Ccne1Q61457 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.15■□□□□ 0.98
Ccne1Q61457 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccne1Q61457 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccne1Q61457 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccne1Q61457 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.14■□□□□ 0.98
Ccne1Q61457 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccne1Q61457 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccne1Q61457 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccne1Q61457 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccne1Q61457 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccne1Q61457 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccne1Q61457 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccne1Q61457 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccne1Q61457 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccne1Q61457 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccne1Q61457 Gm14494-201ENSMUST00000118786 435 ntBASIC21.13■□□□□ 0.97
Ccne1Q61457 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccne1Q61457 Gm2213-201ENSMUST00000197485 688 ntBASIC21.13■□□□□ 0.97
Ccne1Q61457 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms