Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd1Q61345 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd1Q61345 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd1Q61345 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Foxd1Q61345 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Foxd1Q61345 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Foxd1Q61345 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.81■□□□□ 0.6
Foxd1Q61345 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.81■□□□□ 0.6
Foxd1Q61345 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Foxd1Q61345 Mir6977-201ENSMUST00000184960 64 ntBASIC18.81■□□□□ 0.6
Foxd1Q61345 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd1Q61345 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.81■□□□□ 0.6
Foxd1Q61345 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Foxd1Q61345 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Foxd1Q61345 Gm15173-201ENSMUST00000122049 433 ntBASIC18.8■□□□□ 0.6
Foxd1Q61345 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.8■□□□□ 0.6
Foxd1Q61345 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Foxd1Q61345 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd1Q61345 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Foxd1Q61345 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.79■□□□□ 0.6
Foxd1Q61345 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.79■□□□□ 0.6
Foxd1Q61345 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Foxd1Q61345 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.79■□□□□ 0.6
Foxd1Q61345 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Foxd1Q61345 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.79■□□□□ 0.6
Foxd1Q61345 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd1Q61345 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Gm25990-201ENSMUST00000102440 86 ntBASIC18.78■□□□□ 0.6
Foxd1Q61345 Gm13823-201ENSMUST00000119930 345 ntBASIC18.78■□□□□ 0.6
Foxd1Q61345 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.78■□□□□ 0.6
Foxd1Q61345 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.78■□□□□ 0.6
Foxd1Q61345 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Foxd1Q61345 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.78■□□□□ 0.6
Foxd1Q61345 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.78■□□□□ 0.6
Foxd1Q61345 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Foxd1Q61345 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd1Q61345 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd1Q61345 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Foxd1Q61345 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.77■□□□□ 0.6
Foxd1Q61345 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd1Q61345 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.77■□□□□ 0.6
Foxd1Q61345 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd1Q61345 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.77■□□□□ 0.6
Foxd1Q61345 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.77■□□□□ 0.6
Foxd1Q61345 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.77■□□□□ 0.6
Foxd1Q61345 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.77■□□□□ 0.6
Foxd1Q61345 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.77■□□□□ 0.6
Foxd1Q61345 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.77■□□□□ 0.6
Foxd1Q61345 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd1Q61345 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.77■□□□□ 0.6
Foxd1Q61345 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Foxd1Q61345 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd1Q61345 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd1Q61345 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd1Q61345 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Foxd1Q61345 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Foxd1Q61345 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms