Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.49■□□□□ 0.23
Six4Q61321 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six4Q61321 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Six4Q61321 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Six4Q61321 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.48■□□□□ 0.23
Six4Q61321 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.48■□□□□ 0.23
Six4Q61321 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.48■□□□□ 0.23
Six4Q61321 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six4Q61321 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Six4Q61321 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Six4Q61321 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.47■□□□□ 0.23
Six4Q61321 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.47■□□□□ 0.23
Six4Q61321 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Six4Q61321 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.47■□□□□ 0.23
Six4Q61321 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Six4Q61321 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Six4Q61321 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six4Q61321 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.46■□□□□ 0.23
Six4Q61321 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.46■□□□□ 0.23
Six4Q61321 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Six4Q61321 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.46■□□□□ 0.23
Six4Q61321 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Six4Q61321 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Six4Q61321 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.46■□□□□ 0.23
Six4Q61321 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six4Q61321 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Six4Q61321 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Six4Q61321 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.45■□□□□ 0.22
Six4Q61321 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Six4Q61321 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.45■□□□□ 0.22
Six4Q61321 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.45■□□□□ 0.22
Six4Q61321 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Six4Q61321 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.45■□□□□ 0.22
Six4Q61321 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Six4Q61321 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.45■□□□□ 0.22
Six4Q61321 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six4Q61321 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Six4Q61321 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Six4Q61321 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms