Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.52■□□□□ 0.24
Hif1aQ61221 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Hif1aQ61221 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hif1aQ61221 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hif1aQ61221 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Hif1aQ61221 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hif1aQ61221 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hif1aQ61221 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Hif1aQ61221 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hif1aQ61221 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hif1aQ61221 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hif1aQ61221 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Hif1aQ61221 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Hif1aQ61221 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.51■□□□□ 0.23
Hif1aQ61221 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Hif1aQ61221 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.51■□□□□ 0.23
Hif1aQ61221 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hif1aQ61221 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hif1aQ61221 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hif1aQ61221 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.49■□□□□ 0.23
Hif1aQ61221 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hif1aQ61221 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.49■□□□□ 0.23
Hif1aQ61221 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Hif1aQ61221 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hif1aQ61221 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.49■□□□□ 0.23
Hif1aQ61221 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.49■□□□□ 0.23
Hif1aQ61221 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Hif1aQ61221 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.49■□□□□ 0.23
Hif1aQ61221 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hif1aQ61221 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hif1aQ61221 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.48■□□□□ 0.23
Hif1aQ61221 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Hif1aQ61221 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.48■□□□□ 0.23
Hif1aQ61221 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.48■□□□□ 0.23
Hif1aQ61221 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Hif1aQ61221 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hif1aQ61221 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hif1aQ61221 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms