Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ptch1Q61115 Fgf17-202ENSMUST00000227123 1336 ntBASIC23.44■■□□□ 1.34
Ptch1Q61115 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch1Q61115 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch1Q61115 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch1Q61115 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC23.44■■□□□ 1.34
Ptch1Q61115 CT025535.1-201ENSMUST00000227172 491 ntBASIC23.44■■□□□ 1.34
Ptch1Q61115 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch1Q61115 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch1Q61115 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch1Q61115 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptch1Q61115 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC23.43■■□□□ 1.34
Ptch1Q61115 Gm23547-201ENSMUST00000158210 271 ntBASIC23.43■■□□□ 1.34
Ptch1Q61115 Gm43125-201ENSMUST00000201724 730 ntBASIC23.43■■□□□ 1.34
Ptch1Q61115 Gm20553-201ENSMUST00000204205 844 ntBASIC23.43■■□□□ 1.34
Ptch1Q61115 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC23.43■■□□□ 1.34
Ptch1Q61115 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ptch1Q61115 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptch1Q61115 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptch1Q61115 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptch1Q61115 Gm5366-201ENSMUST00000215494 1338 ntBASIC23.43■■□□□ 1.34
Ptch1Q61115 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptch1Q61115 Gm12428-201ENSMUST00000119844 727 ntBASIC23.42■■□□□ 1.34
Ptch1Q61115 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Gm13294-201ENSMUST00000121757 1330 ntBASIC23.42■■□□□ 1.34
Ptch1Q61115 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Gm15358-201ENSMUST00000119249 520 ntBASIC23.42■■□□□ 1.34
Ptch1Q61115 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC23.42■■□□□ 1.34
Ptch1Q61115 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Ptch1Q61115 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptch1Q61115 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ptch1Q61115 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptch1Q61115 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
Ptch1Q61115 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptch1Q61115 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC23.41■■□□□ 1.34
Ptch1Q61115 Gm7787-201ENSMUST00000216858 688 ntBASIC23.41■■□□□ 1.34
Ptch1Q61115 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Ptch1Q61115 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ptch1Q61115 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptch1Q61115 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ptch1Q61115 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ptch1Q61115 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC23.4■■□□□ 1.34
Ptch1Q61115 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ptch1Q61115 Gm18489-201ENSMUST00000172565 551 ntBASIC23.4■■□□□ 1.34
Ptch1Q61115 Gm18889-201ENSMUST00000174284 929 ntBASIC23.4■■□□□ 1.34
Ptch1Q61115 Mir7036b-201ENSMUST00000184791 63 ntBASIC23.4■■□□□ 1.34
Ptch1Q61115 AC140375.2-201ENSMUST00000225283 584 ntBASIC23.4■■□□□ 1.34
Ptch1Q61115 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptch1Q61115 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ptch1Q61115 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.34
Ptch1Q61115 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ptch1Q61115 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ptch1Q61115 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ptch1Q61115 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Ptch1Q61115 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptch1Q61115 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC23.39■■□□□ 1.33
Ptch1Q61115 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.33
Ptch1Q61115 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Ptch1Q61115 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Ptch1Q61115 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptch1Q61115 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptch1Q61115 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptch1Q61115 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptch1Q61115 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptch1Q61115 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms