Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.57■□□□□ 0.24
Sdf4Q61112 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Sdf4Q61112 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sdf4Q61112 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sdf4Q61112 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Mir770-201ENSMUST00000103252 94 ntBASIC16.56■□□□□ 0.24
Sdf4Q61112 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.56■□□□□ 0.24
Sdf4Q61112 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sdf4Q61112 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdf4Q61112 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 AA414768-201ENSMUST00000121924 1257 ntBASIC16.55■□□□□ 0.24
Sdf4Q61112 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.55■□□□□ 0.24
Sdf4Q61112 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdf4Q61112 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sdf4Q61112 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Sdf4Q61112 Gm6623-201ENSMUST00000173570 544 ntBASIC16.54■□□□□ 0.24
Sdf4Q61112 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.54■□□□□ 0.24
Sdf4Q61112 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.54■□□□□ 0.24
Sdf4Q61112 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sdf4Q61112 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.53■□□□□ 0.24
Sdf4Q61112 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sdf4Q61112 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.53■□□□□ 0.24
Sdf4Q61112 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.53■□□□□ 0.24
Sdf4Q61112 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.53■□□□□ 0.24
Sdf4Q61112 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdf4Q61112 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.52■□□□□ 0.24
Sdf4Q61112 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms