Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col12a1Q60847 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.06■□□□□ 0.16
Col12a1Q60847 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.06■□□□□ 0.16
Col12a1Q60847 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.06■□□□□ 0.16
Col12a1Q60847 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col12a1Q60847 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.06■□□□□ 0.16
Col12a1Q60847 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.06■□□□□ 0.16
Col12a1Q60847 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.05■□□□□ 0.16
Col12a1Q60847 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.05■□□□□ 0.16
Col12a1Q60847 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.05■□□□□ 0.16
Col12a1Q60847 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Col12a1Q60847 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col12a1Q60847 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.05■□□□□ 0.16
Col12a1Q60847 Gm11745-201ENSMUST00000121669 448 ntBASIC16.05■□□□□ 0.16
Col12a1Q60847 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col12a1Q60847 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Col12a1Q60847 Gm5177-201ENSMUST00000183092 997 ntBASIC16.05■□□□□ 0.16
Col12a1Q60847 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.05■□□□□ 0.16
Col12a1Q60847 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.05■□□□□ 0.16
Col12a1Q60847 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col12a1Q60847 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.04■□□□□ 0.16
Col12a1Q60847 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col12a1Q60847 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.04■□□□□ 0.16
Col12a1Q60847 Gm15427-201ENSMUST00000117288 531 ntBASIC16.04■□□□□ 0.16
Col12a1Q60847 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.04■□□□□ 0.16
Col12a1Q60847 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.04■□□□□ 0.16
Col12a1Q60847 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Gm25857-201ENSMUST00000082788 129 ntBASIC16.04■□□□□ 0.16
Col12a1Q60847 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.04■□□□□ 0.16
Col12a1Q60847 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col12a1Q60847 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.03■□□□□ 0.16
Col12a1Q60847 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.03■□□□□ 0.16
Col12a1Q60847 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.03■□□□□ 0.16
Col12a1Q60847 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.03■□□□□ 0.16
Col12a1Q60847 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.03■□□□□ 0.16
Col12a1Q60847 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col12a1Q60847 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Gm27306-201ENSMUST00000183970 107 ntBASIC16.03■□□□□ 0.16
Col12a1Q60847 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.03■□□□□ 0.16
Col12a1Q60847 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.03■□□□□ 0.16
Col12a1Q60847 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col12a1Q60847 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col12a1Q60847 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col12a1Q60847 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col12a1Q60847 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col12a1Q60847 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col12a1Q60847 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col12a1Q60847 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col12a1Q60847 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col12a1Q60847 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col12a1Q60847 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col12a1Q60847 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col12a1Q60847 Gm20553-201ENSMUST00000204205 844 ntBASIC16.02■□□□□ 0.15
Col12a1Q60847 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.02■□□□□ 0.15
Col12a1Q60847 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col12a1Q60847 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.02■□□□□ 0.15
Col12a1Q60847 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
Col12a1Q60847 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.02■□□□□ 0.15
Col12a1Q60847 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.01■□□□□ 0.15
Col12a1Q60847 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Col12a1Q60847 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms