Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna2d4Q5RJF7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cacna2d4Q5RJF7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna2d4Q5RJF7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna2d4Q5RJF7 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.21■□□□□ 0.5
Cacna2d4Q5RJF7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.2■□□□□ 0.5
Cacna2d4Q5RJF7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna2d4Q5RJF7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cacna2d4Q5RJF7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.17■□□□□ 0.5
Cacna2d4Q5RJF7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms