Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.03□□□□□ -0.32
Trav2Q5R1I9 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav2Q5R1I9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav2Q5R1I9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav2Q5R1I9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav2Q5R1I9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav2Q5R1I9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav2Q5R1I9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Gm13312-201ENSMUST00000119631 718 ntBASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Gm12895-201ENSMUST00000122214 226 ntBASIC13.01□□□□□ -0.33
Trav2Q5R1I9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms