Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-4Q5R1H9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Gm6576-201ENSMUST00000169678 883 ntBASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-4Q5R1H9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms