Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav5d-4Q5R1F6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Mir1668-201ENSMUST00000184114 107 ntBASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Gm44450-201ENSMUST00000199528 114 ntBASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5d-4Q5R1F6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Gm11336-201ENSMUST00000118168 334 ntBASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Gm26039-201ENSMUST00000158152 144 ntBASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav5d-4Q5R1F6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms