Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm11249-201ENSMUST00000117071 859 ntBASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm37292-201ENSMUST00000192062 758 ntBASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm42569-201ENSMUST00000200539 472 ntBASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms