Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Gm44771-201ENSMUST00000206975 626 ntBASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rc3h1Q4VGL6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Rc3h1Q4VGL6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rc3h1Q4VGL6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rc3h1Q4VGL6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms