Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx49Q4FZF3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Gm6550-201ENSMUST00000187574 993 ntBASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.95■□□□□ 0.62
Ddx49Q4FZF3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx49Q4FZF3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Gm9727-201ENSMUST00000161387 555 ntBASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Gm27628-201ENSMUST00000184911 107 ntBASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Gm6089-201ENSMUST00000197666 938 ntBASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx49Q4FZF3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx49Q4FZF3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ddx49Q4FZF3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx49Q4FZF3 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.91■□□□□ 0.62
Ddx49Q4FZF3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx49Q4FZF3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx49Q4FZF3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms