Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col5a2Q3U962 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col5a2Q3U962 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col5a2Q3U962 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col5a2Q3U962 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.28■□□□□ 0.68
Col5a2Q3U962 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Mir7023-201ENSMUST00000185093 64 ntBASIC19.28■□□□□ 0.68
Col5a2Q3U962 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col5a2Q3U962 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col5a2Q3U962 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Col5a2Q3U962 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col5a2Q3U962 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.27■□□□□ 0.68
Col5a2Q3U962 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col5a2Q3U962 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col5a2Q3U962 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col5a2Q3U962 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col5a2Q3U962 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Gm15427-201ENSMUST00000117288 531 ntBASIC19.26■□□□□ 0.67
Col5a2Q3U962 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.26■□□□□ 0.67
Col5a2Q3U962 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Gm17271-201ENSMUST00000165535 355 ntBASIC19.26■□□□□ 0.67
Col5a2Q3U962 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.26■□□□□ 0.67
Col5a2Q3U962 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.26■□□□□ 0.67
Col5a2Q3U962 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col5a2Q3U962 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.25■□□□□ 0.67
Col5a2Q3U962 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.25■□□□□ 0.67
Col5a2Q3U962 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Gm20949-201ENSMUST00000206478 952 ntBASIC19.25■□□□□ 0.67
Col5a2Q3U962 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col5a2Q3U962 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms