Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ptchd3Q0EEE2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.8■□□□□ 0.12
Ptchd3Q0EEE2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Prob1-201ENSMUST00000097619 3021 ntBASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptchd3Q0EEE2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptchd3Q0EEE2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms